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Fern_plastome_list

Here is a list (comma separated) of fern (moniliform) plastomes published in genbank. You can downoad the csv from bottom of page. The list includes complete plastomes as well as fragments greater than 10 kb.

Please email me at paul.wolf@usu.edu if you want me to add taxa "in progress", or if you know of GenBank entries that are not listed below, or you want email notification of updates. Thanks.

Last updated 5 March 2017: 40 plastomes

Taxon,Accession
Actinostachys pennula, KU764518
Adiantum capillus-veneris, NC_004766
Alsophila spinulosa ,NC_012818
Angiopteris angustifolia, NC_026300
Angiopteris evecta, NC_008829
Azolla caroliniana, KC626076
Botrychium ternatum, KM817789
Ceratopteris richardii, KM052729
Cheilanthes lindheimeri, NC_014592
Cystopteris protrusa, KP136830
Cyrtomium devexiscapulae, NC_028542
Cyrtomium falcatum, NC_028705
Dicksonia antarctica (fragment), HM021802
Dicksonia squarrosa, KJ569698
Diplopterygium glaucum, NC_024158
Dipteris conjugata, KP136829
Drynaria roosii, KY075853
Dryopteris fragrans, KX418656
Equisetum arvense (USA), NC_014699
Equisetum arvense (Korea), JN968380
Equisetum arvense (fragment), HQ658110
Equisetum hyemale, NC_020146
Equisetum hyemale (fragment), KC610090
Equisetum ramosissimum (fragment), HQ658109
Gleichenia japonica (fragment), HM021798
Helminthostachys zeylanica, KM817788
Lygodium japonicum, NC_022136
Mankyua chejuensis, NC_017006
Marsilea crenata, NC_022137
Marsilea mutica (fragment), HM021801
Ophioglossum californicum, NC_020147
Osmundastrum cinnamomeum, NC_024157
Osmundastrum cinnamomeum (fragment), HM021799
Plagiogyria formosana, KP136831
Plagiogyria japonica (fragment), HQ658099
Polypodium glycyrrhiza, KP136832
Psilotum nudum, NC_003386
Pteridium aquilinum subsp. aquilinum, NC_014348
Tmesipteris elongata, KJ569699
Vandenboschia radicans (fragment), HM021800
Woodwardia unigemmata, NC_028543 

Plastomes in progress
By Jeff Mower, University of Nebraska, Lincoln:
Thelypteris palustris
Vittaria appalachiana
Osmunda regalis
Gleichenia dicarpa

By Amanda Grusz and Eric Schuettpelz, Smithsonian Institution
Acrostichum danaeifolium
Adiantum capillus-veneris
Adiantum macrophyllum
Adiantum tricholepis
Adiantum aleuticum
Anogramma chaerophylla
Antrophyum semicostatum
Bommeria hispida
Calciphilopteris ludens
Ceratopteris cornuta
Cheilanthes bolborrhiza
Cheilanthes micropteris
Cryptogramma acrostichoides
Haplopteris elongata
Hemionitis subcordata
Jamesonia brasiliensis
Llavea cordifolia
Myriopteris covillei
Myriopteris scabra
Notholaena standleyi
Onychium japonicum
Pellaea truncata
Pentagramma triangularis
Pityrogramma trifoliata
Pteris propinqua
Pteris dimidiata
Pteris vittata
Rheopteris cheesmaniae
Scoliosorus ensiformis
Tryonia myriophylla
Vaginularia trichoidea
Vittaria graminifolia

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fern_plastomes_genbank.csv
(1k)
Paul Wolf,
Apr 23, 2017, 7:12 AM